Bio 322: Evolution Syllabus

 

 

Instructor:

Dr. Frank T. Burbrink

6S-131

College of Staten Island/CUNY

2800 Victory Blvd

Staten Island, NY 10314

burbrink@mail.csi.cuny.edu

718-982-3961

 

               

Course Description:

                The course provides advanced knowledge of the fundamental unifying theory of biology, evolution.   A class that examines a subject of this breadth requires the student to learn how to integrate the fields of genetics, bioinformatics, statistics, ecology, paleobiology, behavior, medicine and morphology.  Understanding these fields and their interactions ultimately provides a clearer picture of modern evolution.  We will examine the history of the study of evolution, microevolution, quantitative genetics, macroevolution, phylogenetics, and speciation.  Moreover, understanding and summarizing all of these diverse concepts into a comprehensive working knowledge of evolution requires an understanding of the philosophy of data interpretation, experimental design, and logical thinking. Class participation and group discussions will depend on the student’s familiarity with each topic the day it is presented.    Therefore, students are expected to read the textbook chapters and handouts prior to the day that a particular topic is presented.  It is the hope of the instructor that each student will have a working knowledge of all major concepts in evolution and have a deep understanding of the philosophy of scientific thought as applied to this most important theory in biology.  

 

Text:

Evolutionary Analysis (4th edition)(Published by Pearson/ Prentice Hall)

by Scott Freeman and Jon C. Herron

 

Grading:

Midterm                 30%

Final                       40%

Project                    20%

Participation          10%

 

Tentative Class Schedule:

 

Session                  Topic                                                                                                                      Readings:

1                              Introduction to the course and evolution                       

2                              What is Evolution, HIV Example?                                                                     Chapter 1-2

3                              Understanding the mechanics of Evolution                                                    Chapter 2

4                              Evidence for Evolution                                                                                       Chapter 2

5                              Natural Selection                                                                                                  Chapter 3

6                              Natural Selection II                                                                                              Chapter 3

7                              Mutation and genetic variation                                                                         Chapter 5

8                              Mutation and genetic variation II                                                                     Chapter 5

9                              Population genetics I: Hardy-Weinberg Equilibrium                                     Chapter 6

10                            Population genetics II: Selection                                                                       Chapter 6              

11                            Population Genetics III: Mutation and Migration                                          Chapter 6-7

12                            Population Genetics IV: Genetic Drift                                                               Chapter 7

13                            Population Genetics V: Neutral Theory and Nonrandom Mating                Chapter 7

14                            Introduction to Linkage and Quantitative Genetics                                       Chapter 8-9

15                            Midterm                                                                                

16                            Phylogenetics I: Terminology                                                                            Chapter 4

17                            Phylogenetics II: Parsimony and Likelihood                                                   Chapter 4

18                            Phylogenetics III: Assessing Support for Inferences                                    Handouts             

19                            Phylogenetics IV: Biogeography and Cospeciation                                      Chapter 4

20                            Species Concepts                                                                                                Chapter 16

21                            Mechanisms of Speciation                                                                                 Chapter 16

22                            My research

23                            Adaptation                                                                                                           Chapter 10

24                            Sexual Selection                                                                                                   Chapter 11

25                            Kin Selection                                                                                                        Chapter 12

26                            History of the Study of Evolution                                                                    Lecture Only

27                           Evo-Devo                                                                                                              Chapter 19

28                           The Cambrian explosion                                                                                     Chapter 18

29                           Human Evolution                                                                                                 Chapter 20

 

Below you find the Powerpoint lecture corresponding to a session.  It would be wise to print the text from these lectures and bring them to class so that you don't waste time trying to copy the material from the board.  All lectures are subject to a certain amount of change prior to class

 

Lecture 1

Lecture 2

Lecture 3

Lecture 4

Lecture 5

Lecture 6

Lecture 7

Lecture 8

Lecture 9

Lecture 10

Lecture 11

Lecture 12

Lecture 13

Lecture 14

Lecture 15

Lecture 16

Lecture 17

Lecture 18

Lecture 19

Lecture 20

Lecture 21

Lecture 22

Lecture 23

 

 

Hardy-Weinberg/ Selection Example